The detailed information of tRNA gene sequence


Sequence ID>SRA1014512
Genome IDSRR023845.174118
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 35
End posion on genome 107
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
gagaaggtgc
tRNA gene sequence
TCCCAAATAGTCTAGGCGGTTAGGATACGTGGCTTTCACCCACGCGACCCGGGTTCGAGT
CCCGGTTTGGGAAttt
Downstream region at tRNA end position
tgctttttcg
Secondary structure (Cloverleaf model)
>SRA1014512	Glu	TTC
                   c      Attt tgctttttcg
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T G
                    T     G G C C C     A
      G G A        A      | | | | |     G
    C       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     CGAC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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