The detailed information of tRNA gene sequence


Sequence ID>SRA1014514
Genome IDSRR023845.174775
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 152
End posion on genome 239
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttataatt
tRNA gene sequence 
AGAGAAGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGCTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCCTTCTCTGCAA
Downstream region at tRNA end position 
aaaggtccgt
Secondary structure (Cloverleaf model)
>SRA1014514	Ser	TGA
                   t      GCAA aaaggtccgt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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