The detailed information of tRNA gene sequence


Sequence ID>SRA1014517
Genome IDSRR023845.178367
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 240
End posion on genome 164
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnncgttc
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGTAAGTTCAAC
TCTTACTCGGCCCACCA
Downstream region at tRNA end position 
acgcactggc
Secondary structure (Cloverleaf model)
>SRA1014517	Ile	GAT
                   c      ACCA acgcactggc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T C
                    T     C A T T C     A
      G G A        A      | | | | |     A
    T       C T C G       G T A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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