The detailed information of tRNA gene sequence


Sequence ID>SRA1014572
Genome IDSRR023845.206696
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 211
End posion on genome 136
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ggcgtcggtg
tRNA gene sequence
GGGCCTGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGATT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position
acacccctgc
Secondary structure (Cloverleaf model)
>SRA1014572	Met	CAT
                   g      ACCA acacccctgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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