The detailed information of tRNA gene sequence


Sequence ID>SRA1014586
Genome IDSRR023845.212962
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 80
End posion on genome 154
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cagcaaaagc
tRNA gene sequence 
GCTGCGGTAGCTCAGTGGTAGAGCACTCCATTGGTAATGGAGAGGTCGGGAGTTCAATCC
TCCCTCGCAGCACCA
Downstream region at tRNA end position 
tcatctgctt
Secondary structure (Cloverleaf model)
>SRA1014586	Thr	GGT
                   c      ACCA tcatctgctt
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T          C T
                    T     C C C T C     A
        G A        A      | | | | |     A
      T     C T C G       G G G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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