The detailed information of tRNA gene sequence


Sequence ID>SRA1014592
Genome IDSRR023845.215094
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 66
End posion on genome 142
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
tcgctagaga
tRNA gene sequence
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position
tccttcacgg
Secondary structure (Cloverleaf model)
>SRA1014592	Asp	GTC
                   a      GCCA tccttcacgg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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