The detailed information of tRNA gene sequence


Sequence ID>SRA1014594
Genome IDSRR023845.215281
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 80
End posion on genome 5
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
gtattcgagT
tRNA gene sequence 
GTCGGTGTCGTCTAGTGGTTAGGACGTGAGCTTAACACGCTCAAGATCGAGGGTTCGATC
CCCTCCTCCGATATCt
Downstream region at tRNA end position 
tcannnnnnn
Secondary structure (Cloverleaf model)
>SRA1014594	Val	AAC
                   T      ATCt tcannnnnnn
                     G + T
                     T - A
                     C - G
                     G - C
                     G - C
                     T   T
                     G - C          C T
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G A G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AGATC
                    T - A
                    G - C
                    A - T
                    G - C
                    C - G
                  T       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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