The detailed information of tRNA gene sequence


Sequence ID>SRA1014622
Genome IDSRR023845.231347
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 210
End posion on genome 118
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgctgcagcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCGGTTTGCTAAACCGCCGTACCGGGTTTACTG
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
aaactgatat
Secondary structure (Cloverleaf model)
>SRA1014622	Ser	GCT
                   c      GCCA aaactgatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCGGGTTTACTGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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