The detailed information of tRNA gene sequence


Sequence ID>SRA1014635
Genome IDSRR023845.235315
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 144
End posion on genome 220
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
tgcctacgcg
tRNA gene sequence
GCGGTCGTAGTTCAATTGGTTAGAGCGTCGGCTTGTGATGCCGGATGTTGCGGGTTCAAG
TCCCGTCGGTCGCCCCA
Downstream region at tRNA end position
ttttccctta
Secondary structure (Cloverleaf model)
>SRA1014635	His	GTG
                   g      CCCA ttttccctta
                     G - C
                     C - G
                     G - C
                     G + T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     ATGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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