The detailed information of tRNA gene sequence


Sequence ID>SRA1014643
Genome IDSRR023845.238509
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 120
End posion on genome 44
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
gcgaccgcct
tRNA gene sequence
AGGAGTGTAGCTCAGTTGGTTAGAGCGTCGGTCTCCAAAACCGAAGGCCCTCGGTTCGAA
TCCGAGCACTCCTGCCA
Downstream region at tRNA end position
caacgccccg
Secondary structure (Cloverleaf model)
>SRA1014643	Trp	CCA
                   t      GCCA caacgccccg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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