The detailed information of tRNA gene sequence


Sequence ID>SRA1014663
Genome IDSRR023845.248883
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 164
End posion on genome 237
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgaaaataaa
tRNA gene sequence 
GCGCTCTTAGTTCAGTTCGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAA
TCCTACAGAGCGTGatt
Downstream region at tRNA end position 
ccattcttgt
Secondary structure (Cloverleaf model)
>SRA1014663	Trp	CCA
                   a      Gatt ccattcttgt
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T A G G     C
    C       | | | |                 T T
    G       G A A C
      G T A        G     ATGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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