The detailed information of tRNA gene sequence


Sequence ID>SRA1014669
Genome IDSRR023845.254703
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 257
End posion on genome 181
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnncggtac
tRNA gene sequence 
GGCGAAGTAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
tttttgcgta
Secondary structure (Cloverleaf model)
>SRA1014669	Met	CAT
                   c      ACCA tttttgcgta
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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