The detailed information of tRNA gene sequence


Sequence ID>SRA1014710
Genome IDSRR023845.274824
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 75
End posion on genome 167
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgagcc
tRNA gene sequence 
GGAGACGTGGGTGAGCGGCTGAAACCAGCGGTTTGCTAAACCGCCGTACCGGGATTACTG
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gcatggcatg
Secondary structure (Cloverleaf model)
>SRA1014710	Ser	GCT
                   c      GCCA gcatggcatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCGGGATTACTGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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