The detailed information of tRNA gene sequence


Sequence ID>SRA1014725
Genome IDSRR023845.284521
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 142
End posion on genome 217
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggacggtac
tRNA gene sequence 
GGCGAAGTAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGTTCAAGT
CCCTCCTTCGCTACCA
Downstream region at tRNA end position 
tccttgcgta
Secondary structure (Cloverleaf model)
>SRA1014725	Met	CAT
                   c      ACCA tccttgcgta
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A        + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGT
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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