The detailed information of tRNA gene sequence


Sequence ID>SRA1014727
Genome IDSRR023845.284838
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 249
End posion on genome 174
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccggaatgt
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCTTCCATGGCATGGAAGAGGTCATCGGTTCGATC
CCGTTAGGCTCCACCA
Downstream region at tRNA end position 
attcccttcg
Secondary structure (Cloverleaf model)
>SRA1014727	Ala	GGC
                   t      ACCA attcccttcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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