The detailed information of tRNA gene sequence


Sequence ID>SRA1014796
Genome IDSRR023845.318091
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 10
End posion on genome 85
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ntgacgatgt
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCTTCCATGGCATGGAAGAGGTCATCGGTTCGATC
CCGTTAGGCTCCACCA
Downstream region at tRNA end position 
gtccggtccg
Secondary structure (Cloverleaf model)
>SRA1014796	Ala	GGC
                   t      ACCA gtccggtccg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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