The detailed information of tRNA gene sequence


Sequence ID>SRA1014797
Genome IDSRR023845.318145
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 184
End posion on genome 110
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cctccgatcc
tRNA gene sequence 
GCGCCCATCGTCTAGCGGTTAGGACAGGTCCCTCTCACGGATCAGACCGGGGTTCGATTC
CCCGTGGGCGCGCCA
Downstream region at tRNA end position 
acaacttttc
Secondary structure (Cloverleaf model)
>SRA1014797	Glu	CTC
                   c      GCCA acaacttttc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AGAC
                    G - C
                    G + T
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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