The detailed information of tRNA gene sequence


Sequence ID>SRA1014817
Genome IDSRR023845.325948
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 277
End posion on genome 203
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTGAGAGCGCACGACTCATAATCGTGAGGTCGCGGGTTCAAG
CCCCGCTCCCGCTACgt
Downstream region at tRNA end position 
cagctcccgg
Secondary structure (Cloverleaf model)
>SRA1014817	Met	CAT
                   c      ACgt cagctcccgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C G
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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