The detailed information of tRNA gene sequence


Sequence ID>SRA1014840
Genome IDSRR023845.339068
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 161
End posion on genome 250
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
gatgacctgc
tRNA gene sequence
GGAGAGGTGGCAGAGTGGTCGAACGTACCGCACTCGAAATGCGGCGTACCCGCGAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
ttactttnnn
Secondary structure (Cloverleaf model)
>SRA1014840	Ser	CGA
                   c      GCCA ttactttnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G           | +                 T T
    T       A C G T
      C G A        A     CGTACCCGCGAGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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