The detailed information of tRNA gene sequence


Sequence ID>SRA1014843
Genome IDSRR023845.339902
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 52
End posion on genome 128
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgtctacca
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
tccagtaagg
Secondary structure (Cloverleaf model)
>SRA1014843	Asp	GTC
                   a      GCCA tccagtaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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