The detailed information of tRNA gene sequence


Sequence ID>SRA1014865
Genome IDSRR023845.351377
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 237
End posion on genome 163
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttccccgcat
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGTCGCCCTCTCACGGCGAAAGCACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
gcttcaactc
Secondary structure (Cloverleaf model)
>SRA1014865	Glu	CTC
                   t      ACCA gcttcaactc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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