The detailed information of tRNA gene sequence


Sequence ID>SRA1014867
Genome IDSRR023845.352773
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 23
End posion on genome 99
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgctgtttca
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tcgtttgnnn
Secondary structure (Cloverleaf model)
>SRA1014867	Asp	GTC
                   a      GCCA tcgtttgnnn
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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