The detailed information of tRNA gene sequence


Sequence ID>SRA1014873
Genome IDSRR023845.355142
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 175
End posion on genome 264
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgatcc
tRNA gene sequence 
GGAGACGTGGGTGAGCGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ccaggnnnnn
Secondary structure (Cloverleaf model)
>SRA1014873	Ser	GCT
                   c      GCCA ccaggnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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