The detailed information of tRNA gene sequence


Sequence ID>SRA1014900
Genome IDSRR023845.372898
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 176
End posion on genome 251
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttcccccgtg
tRNA gene sequence 
GCCGGCTTAGCTCAGCTGGTAGAGCACCTGATTTGTAATCAGGGGGTCGCGGGTTCGAGC
CCTGCAGCCGGCACCA
Downstream region at tRNA end position 
ttcagctnnn
Secondary structure (Cloverleaf model)
>SRA1014900	Thr	TGT
                   g      ACCA ttcagctnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          C G
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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