The detailed information of tRNA gene sequence


Sequence ID>SRA1014954
Genome IDSRR023845.396022
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 268
End posion on genome 194
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnccg
tRNA gene sequence 
GGGGCTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCATAGGTTCAAG
TCCTATTAGCCCCACgc
Downstream region at tRNA end position 
agtaccggtc
Secondary structure (Cloverleaf model)
>SRA1014954	Ile	GAT
                   g      ACgc agtaccggtc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T A T C C     A
      G G A        A      | | | | |     A
    C       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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