The detailed information of tRNA gene sequence


Sequence ID>SRA1014971
Genome IDSRR023845.403438
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 101
End posion on genome 25
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcagaaaat
tRNA gene sequence 
GGTTCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
CCCCGTCCGGACCGCCA
Downstream region at tRNA end position 
ctgaaaatca
Secondary structure (Cloverleaf model)
>SRA1014971	Asp	GTC
                   t      GCCA ctgaaaatca
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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