The detailed information of tRNA gene sequence


Sequence ID>SRA1014973
Genome IDSRR023845.404035
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 125
End posion on genome 201
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tccacatctt
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCAGGGTCGCCA
Downstream region at tRNA end position 
cgctcggtcg
Secondary structure (Cloverleaf model)
>SRA1014973	Asp	GTC
                   t      GCCA cgctcggtcg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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