The detailed information of tRNA gene sequence


Sequence ID>SRA1015001
Genome IDSRR023845.419293
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 200
End posion on genome 289
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
cggcgcggac
tRNA gene sequence
GGAAGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGGGCAACTCCA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position
atatannnnn
Secondary structure (Cloverleaf model)
>SRA1015001	Ser	TGA
                   c      GCCA atatannnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGGGCAACTCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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