The detailed information of tRNA gene sequence


Sequence ID>SRA1015017
Genome IDSRR023845.424501
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 144
End posion on genome 69
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgccggtg
tRNA gene sequence 
GGGCCTGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGATT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
attcctccac
Secondary structure (Cloverleaf model)
>SRA1015017	Met	CAT
                   g      ACCA attcctccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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