The detailed information of tRNA gene sequence


Sequence ID>SRA1015040
Genome IDSRR023845.430434
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 106
End posion on genome 181
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actctcgatt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCGTCGGTTCGATC
CCGACTGGCTCCACCA
Downstream region at tRNA end position 
ttcctctccc
Secondary structure (Cloverleaf model)
>SRA1015040	Ala	TGC
                   t      ACCA ttcctctccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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