The detailed information of tRNA gene sequence


Sequence ID>SRA1015055
Genome IDSRR023845.441628
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 30
End posion on genome 105
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccacatctt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCAGTTGCTTTGCAAGCATCAGGTCGTCGGTTCGATC
CCGTCCAGCTCCACCA
Downstream region at tRNA end position 
ttcctctccc
Secondary structure (Cloverleaf model)
>SRA1015055	Ala	TGC
                   t      ACCA ttcctctccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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