The detailed information of tRNA gene sequence


Sequence ID>SRA1015061
Genome IDSRR023845.445393
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 156
End posion on genome 64
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgaatccac
tRNA gene sequence 
GGAGCGTTGGCCGAGAGGCTTAAGGCGCTCGCCTGCTAAGCGAGTTGGGGGTTGAAAGCT
CCCTCGGGGGTTCGAATCCCCCACGCTCCGCCT
Downstream region at tRNA end position 
gtcggaaccc
Secondary structure (Cloverleaf model)
>SRA1015061	Ser	GCT
                   c      GCCT gtcggaaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTGGGGGTTGAAAGCTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK