The detailed information of tRNA gene sequence


Sequence ID>SRA1015074
Genome IDSRR023845.448549
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 171
End posion on genome 246
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caacgggaat
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGTTCGCATGGCATGCGAAAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
ttctccgttg
Secondary structure (Cloverleaf model)
>SRA1015074	Ala	GGC
                   t      ACCA ttctccgttg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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