The detailed information of tRNA gene sequence


Sequence ID>SRA1015129
Genome IDSRR023845.470823
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 74
End posion on genome 149
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccgggccgc
tRNA gene sequence 
GGGCCGGTAGCTCAATGGTCAGAGCAGCGAACTCATAATTCGTCCGATGCGGGTTCGAGT
CCCGCCCGGCCCATCA
Downstream region at tRNA end position 
gccctccgcg
Secondary structure (Cloverleaf model)
>SRA1015129	Met	CAT
                   c      ATCA gccctccgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     CCGAT
                    G + T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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