The detailed information of tRNA gene sequence


Sequence ID>SRA1015138
Genome IDSRR023845.474520
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 53
End posion on genome 142
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgatcc
tRNA gene sequence 
GGAGACGTGGGTGAGCGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tctggcctcg
Secondary structure (Cloverleaf model)
>SRA1015138	Ser	GCT
                   c      GCCA tctggcctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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