The detailed information of tRNA gene sequence


Sequence ID>SRA1015145
Genome IDSRR023845.477306
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 105
End posion on genome 30
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aagtgcgttt
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
tttcgcagtc
Secondary structure (Cloverleaf model)
>SRA1015145	Ala	TGC
                   t      ACCA tttcgcagtc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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