The detailed information of tRNA gene sequence


Sequence ID>SRA1015152
Genome IDSRR023845.478538
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 54
End posion on genome 129
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccaaccgcgc
tRNA gene sequence 
GGGGCCGTAGCTCAGATGGGAGAGCGCTGCAATCGCACTGCAGAGGTCAGGGGTTCGATT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
cgcggaaccc
Secondary structure (Cloverleaf model)
>SRA1015152	Ala	CGC
                   c      ACCA cgcggaaccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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