The detailed information of tRNA gene sequence


Sequence ID>SRA1015158
Genome IDSRR023845.481589
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 50
End posion on genome 139
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgtgtacgc
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGTAGGGGTAACTCTA
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
atgcttcgtt
Secondary structure (Cloverleaf model)
>SRA1015158	Ser	TGA
                   c      GCCA atgcttcgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGTAGGGGTAACTCTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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