The detailed information of tRNA gene sequence


Sequence ID>SRA1015165
Genome IDSRR023845.483365
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 239
End posion on genome 149
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
nnagcaatgc
tRNA gene sequence
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position
cccgcctttg
Secondary structure (Cloverleaf model)
>SRA1015165	Ser	GGA
                   c      GCCA cccgcctttg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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