The detailed information of tRNA gene sequence


Sequence ID>SRA1015171
Genome IDSRR023845.486524
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 264
End posion on genome 189
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcaacgagat
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTAGAGCGGATCCCTTACACGGATTAGGTCGGGAGTTCGAGC
CTCTCAGCGCCCACCA
Downstream region at tRNA end position 
agcatctcga
Secondary structure (Cloverleaf model)
>SRA1015171	Val	TAC
                   t      ACCA agcatctcga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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