The detailed information of tRNA gene sequence


Sequence ID>SRA1015176
Genome IDSRR023845.488219
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 133
End posion on genome 206
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccgccaccgg
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGTTACGCAGAGGACTGCAAATCCTTGCACGGGGGTTCGATTCC
CTCCGAGGCCTCCA
Downstream region at tRNA end position 
tccttccttt
Secondary structure (Cloverleaf model)
>SRA1015176	Cys	GCA
                   g      TCCA tccttccttt
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     G G C G       G G G G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GCAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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