The detailed information of tRNA gene sequence


Sequence ID>SRA1015179
Genome IDSRR023845.490005
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 21
End posion on genome 99
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtgttatggc
tRNA gene sequence 
GCCTCGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATGTGAAGGTCGGGTCCCTGGTT
CGATCCCGGGTCGCGGCACtt
Downstream region at tRNA end position 
ttacacgcgg
Secondary structure (Cloverleaf model)
>SRA1015179	Phe	GAA
                   c      ACtt ttacacgcgg
                     G - C
                     C - G
                     C - G
                     T   C
                     C - G
                     G - C
                     A - T          C T
                    T     G G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTCGGGTC
                    T - A
                    C - G
                    A - T
                    G   G
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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