The detailed information of tRNA gene sequence


Sequence ID>SRA1015181
Genome IDSRR023845.490221
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 137
End posion on genome 61
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcaatgttgt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCACTGGTCTCGGGGTCCAGGGGTCGTAGGTTCGAA
TCCTATCGCCCCGACCA
Downstream region at tRNA end position 
ttgccgattt
Secondary structure (Cloverleaf model)
>SRA1015181	Pro	CGG
                   t      ACCA ttgccgattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T   T
                  C       G
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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