The detailed information of tRNA gene sequence


Sequence ID>SRA1015189
Genome IDSRR023845.492626
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 105
End posion on genome 20
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aaaggccgtc
tRNA gene sequence 
GCGGGCGTGGCGGAATGGTAGACGCAGCGGACTCAAAATCCGCCGTCCGAAAGGATATGT
CGGTTCGAGTCCGACCGCCCGCACCA
Downstream region at tRNA end position 
cgaccctccc
Secondary structure (Cloverleaf model)
>SRA1015189	Leu	CAA
                   c      ACCA cgaccctccc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T C G G     C
    G         | | |                 T T
    T       A C G C
      A G          A     CGTCCGAAAGGATAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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