The detailed information of tRNA gene sequence


Sequence ID>SRA1015193
Genome IDSRR023845.495130
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aatgggcgtg
tRNA gene sequence
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGCAGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position
ccatttcccg
Secondary structure (Cloverleaf model)
>SRA1015193	Met	CAT
                   g      ACCA ccatttcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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