The detailed information of tRNA gene sequence


Sequence ID>SRA1015238
Genome IDSRR023845.514416
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 121
End posion on genome 211
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
agggcttcgc
tRNA gene sequence
GGAGCGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGAGGGTTAACAGCCC
TCCGCGGGTTCGAATCCCGCCTGCTCCGCCA
Downstream region at tRNA end position
agtcagtcca
Secondary structure (Cloverleaf model)
>SRA1015238	Ser	GGA
                   c      GCCA agtcagtcca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGAGGGTTAACAGCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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