The detailed information of tRNA gene sequence


Sequence ID>SRA1015250
Genome IDSRR023845.519599
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 35
End posion on genome 113
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cagcgggtgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGGTGAGGGTCGGTGGTTCG
AATCCACCTAGGCCCACCA
Downstream region at tRNA end position 
cacacaagtg
Secondary structure (Cloverleaf model)
>SRA1015250	Ile	GAT
                   t      ACCA cacacaagtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GAGGGTC
                    C   T
                    A   G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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