The detailed information of tRNA gene sequence


Sequence ID>SRA1015275
Genome IDSRR023845.535934
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 56
End posion on genome 129
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agtcactcca
tRNA gene sequence 
GCCCCTATCGTCTAGTGGCCTAGGACGGCGCCCTTTCACGGCGTTAACACGGGTTCGAAT
CCCGTTGGGGGTACgc
Downstream region at tRNA end position 
accgcgacgg
Secondary structure (Cloverleaf model)
>SRA1015275	Glu	TTC
                   a      ACgc accgcgacgg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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