The detailed information of tRNA gene sequence


Sequence ID>SRA1015278
Genome IDSRR023845.536889
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 163
End posion on genome 236
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgatcattct
tRNA gene sequence 
GGGCCTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGACGTTCGAG
TCGTCCCAGGCCCCgac
Downstream region at tRNA end position 
ccatcttcgt
Secondary structure (Cloverleaf model)
>SRA1015278	Ile	GAT
                   t      Cgac ccatcttcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C C T G C     A
      G G A        A      | | | | |     G
    T       C T C G       G G A C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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