The detailed information of tRNA gene sequence


Sequence ID>SRA1015280
Genome IDSRR023845.537451
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 36
End posion on genome 112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagacggtac
tRNA gene sequence 
GGCGAAGTAGCTCAGTTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
ttttcaaaca
Secondary structure (Cloverleaf model)
>SRA1015280	Met	CAT
                   c      ACCA ttttcaaaca
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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